Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006378.1 Corchorus capsularis cultivar CVL-1 contig06399, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36939

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2099--2169
37
1.9
37
85
5
99
36
14
16
32
1.89
1451--2436
434
2.2
435
79
8
1021
31
13
12
42
1.82
4534--4573
11
3.6
11
90
10
55
37
0
2
60
1.11
5384--5421
17
2.2
18
95
4
69
26
7
36
28
1.84
9228--9282
21
2.7
21
80
8
60
21
21
18
38
1.94
15953--16009
17
3.4
17
85
2
71
24
19
19
36
1.94
17255--17330
37
2.1
37
92
5
127
40
7
17
34
1.78
34693--34741
21
2.3
21
82
6
55
14
28
16
40
1.87

Tables:   1

The End!