Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006380.1 Corchorus capsularis cultivar CVL-1 contig06401, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17745

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1775--1829
3
18.3
3
96
0
101
30
1
0
67
1.01
2107--2152
21
2.2
21
96
0
83
36
10
17
34
1.85
9962--9995
15
2.3
15
89
0
50
20
41
17
20
1.91
12106--12141
17
2.1
17
100
0
72
22
30
11
36
1.89
13686--13740
27
2.0
27
92
0
92
25
21
16
36
1.94
17551--17606
25
2.3
23
87
6
76
32
21
0
46
1.52
17615--17682
26
2.6
26
90
0
109
55
8
0
35
1.31

Tables:   1

The End!