Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006388.1 Corchorus capsularis cultivar CVL-1 contig06409, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23565

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3612--3716
33
3.2
32
82
5
129
24
8
20
45
1.79
3703--3783
32
2.5
33
89
2
119
27
7
22
43
1.79
5383--5422
18
2.2
18
86
4
53
45
5
20
30
1.72
8002--8063
31
2.0
31
83
3
79
27
30
27
14
1.95
8115--8190
32
2.4
32
82
2
82
26
23
27
22
1.99
7892--8159
112
2.4
112
90
3
430
31
23
22
22
1.98
8243--8319
32
2.5
31
81
8
84
24
25
27
22
2.00
8064--8448
128
2.8
133
89
8
575
30
21
23
24
1.99
16278--16313
19
1.9
18
88
5
54
41
2
22
33
1.68
23521--23561
20
2.0
21
85
4
57
41
21
21
14
1.89

Tables:   1

The End!