Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006390.1 Corchorus capsularis cultivar CVL-1 contig06411, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4993

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
737--1020
106
2.6
108
84
4
360
32
26
16
24
1.96
737--1025
54
5.4
54
78
2
314
32
25
16
24
1.96
988--1155
35
4.8
35
87
5
225
32
19
16
30
1.94
988--1155
70
2.4
70
91
2
257
32
19
16
30
1.94
2040--2103
11
5.4
12
74
22
55
0
14
4
81
0.85
2041--2120
36
2.3
35
87
8
110
0
11
6
82
0.83
2041--2120
35
2.3
34
87
8
108
0
11
6
82
0.83

Tables:   1

The End!