Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006391.1 Corchorus capsularis cultivar CVL-1 contig06412, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65897

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2060--2109
21
2.4
21
93
0
82
10
40
14
36
1.79
5837--5878
14
3.1
14
83
12
52
78
11
0
9
0.96
5842--5878
7
5.1
7
90
6
56
75
13
0
10
1.04
5842--5878
15
2.5
15
91
4
58
75
13
0
10
1.04
11504--11541
19
2.0
19
89
0
58
44
13
13
28
1.81
18794--18851
21
2.8
21
78
17
59
60
3
31
5
1.35
20606--20642
17
2.2
17
95
0
65
21
37
13
27
1.91
22530--22613
41
2.0
41
100
0
168
39
22
14
23
1.91
26671--26712
6
7.0
6
97
0
75
30
16
16
35
1.92
31823--31863
3
13.7
3
100
0
82
34
0
0
65
0.93
42592--42624
14
2.4
14
94
0
57
33
27
3
36
1.72
47696--47722
14
1.9
14
100
0
54
37
14
11
37
1.82
55029--55059
16
1.9
16
93
0
53
64
12
6
16
1.47
56097--56157
31
1.9
32
90
3
97
42
11
31
14
1.81
56663--56702
20
2.0
20
90
4
64
25
0
22
52
1.47

Tables:   1

The End!