Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006392.1 Corchorus capsularis cultivar CVL-1 contig06413, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4383

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1621--1685
6
10.8
6
79
15
64
81
4
13
0
0.84
1604--1685
42
2.0
42
88
7
123
82
6
10
0
0.82
1602--1692
29
3.0
29
82
9
94
82
5
12
0
0.83
2585--2738
35
4.4
35
90
3
220
30
17
18
33
1.94
2571--2738
70
2.4
70
91
2
266
30
16
19
32
1.94
2701--2973
54
5.1
54
78
3
300
23
17
26
33
1.96
2724--2989
106
2.5
108
86
4
369
22
17
27
32
1.97

Tables:   1

The End!