Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006399.1 Corchorus capsularis cultivar CVL-1 contig06420, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18174

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
624--697
27
2.6
28
87
4
96
40
24
18
16
1.90
9591--9631
15
2.7
15
96
0
73
43
19
29
7
1.78
13977--14007
6
5.3
6
96
3
55
35
0
12
51
1.40
17162--17325
26
6.1
26
74
10
141
21
21
3
53
1.59
17196--17325
54
2.3
56
82
10
151
20
22
3
54
1.58
17265--17321
29
1.9
30
89
7
89
21
22
0
56
1.43
17265--17320
16
3.6
16
74
18
55
21
23
0
55
1.44
17341--17424
27
3.2
26
78
20
86
20
22
2
54
1.56
17341--17458
26
4.3
28
75
15
104
20
22
2
54
1.57
17265--17402
72
1.9
75
85
8
194
21
21
1
55
1.51
17331--17458
53
2.3
56
82
15
153
20
22
2
54
1.56
17239--17425
102
1.9
101
83
11
251
20
21
2
55
1.54
17364--17481
55
2.1
54
81
7
139
16
23
2
56
1.52
17801--17834
16
2.2
16
89
5
52
58
8
2
29
1.43

Tables:   1

The End!