Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006409.1 Corchorus capsularis cultivar CVL-1 contig06430, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14088

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2547--2584
20
1.9
20
88
0
58
21
42
10
26
1.85
2555--2594
21
1.9
20
85
10
53
17
42
12
27
1.85
2820--2889
33
2.1
33
82
12
81
12
32
37
17
1.87
4105--4138
5
7.0
5
90
6
52
85
14
0
0
0.60
5448--5588
73
1.9
73
94
0
246
32
10
14
41
1.81
6379--6433
26
2.1
26
83
6
67
45
1
23
29
1.63
11291--11316
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!