Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006410.1 Corchorus capsularis cultivar CVL-1 contig06431, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14506

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1750--1788
11
3.5
11
89
3
51
76
2
17
2
1.01
2733--2889
35
4.5
35
88
5
219
30
17
18
33
1.94
2721--2889
71
2.4
69
90
4
259
30
17
18
32
1.95
2906--2978
35
2.1
35
89
0
110
32
17
16
32
1.93
2818--3027
89
2.4
88
92
0
348
29
17
20
32
1.95
2941--3313
54
6.9
54
83
3
459
23
17
26
33
1.96
2941--3321
108
3.6
107
87
3
516
23
17
25
33
1.96
3228--3313
29
3.1
29
65
29
69
18
16
31
33
1.93
2954--3342
214
1.8
215
87
2
568
24
16
25
33
1.96
5041--5080
17
2.4
17
95
0
71
32
10
2
55
1.47
5165--5241
24
3.2
23
74
18
59
22
10
2
64
1.36

Tables:   1

The End!