Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006413.1 Corchorus capsularis cultivar CVL-1 contig06434, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25750

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
721--777
30
1.9
30
89
7
89
22
28
17
31
1.97
5386--5411
13
2.0
13
100
0
52
15
7
7
69
1.35
8098--8140
15
2.8
16
78
7
52
9
6
2
81
0.95
13296--13359
19
3.3
19
72
12
67
34
1
23
40
1.64
14076--15070
47
22.7
44
81
10
747
15
25
20
38
1.92
14076--15117
88
11.8
91
81
9
759
15
25
20
39
1.91
14984--15098
40
2.6
46
79
15
127
10
29
17
42
1.82
16147--16344
48
4.1
48
81
4
202
45
23
20
10
1.82
19367--19403
19
2.0
18
89
5
56
40
8
21
29
1.82
20196--20224
9
3.2
9
100
0
58
55
0
31
13
1.39

Tables:   1

The End!