Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006418.1 Corchorus capsularis cultivar CVL-1 contig06439, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7570

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2530--2564
15
2.2
16
90
5
54
17
22
0
60
1.37
2553--2609
15
3.9
15
71
13
55
15
21
5
57
1.57
2661--2746
35
2.5
35
80
3
93
20
17
9
52
1.72
2906--2969
32
2.0
32
88
11
96
25
18
6
50
1.70
3004--3112
45
2.4
46
84
6
132
24
20
8
46
1.77
3733--4229
51
9.9
49
72
12
312
37
15
5
42
1.70
3771--4233
101
4.6
101
90
3
695
36
15
5
41
1.71
6935--7004
27
2.5
28
86
2
97
45
21
17
15
1.85

Tables:   1

The End!