Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006422.1 Corchorus capsularis cultivar CVL-1 contig06443, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13333

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
962--1024
23
2.7
23
78
11
67
9
25
46
19
1.80
986--1082
33
2.9
33
90
3
142
11
27
40
20
1.87
4691--4720
6
5.0
6
100
0
60
16
0
16
66
1.25
7025--7131
33
3.2
33
82
5
119
20
42
28
8
1.81
7046--7155
33
3.3
32
81
7
87
20
44
26
8
1.79
11495--11536
21
2.0
20
86
4
57
40
11
21
26
1.88

Tables:   1

The End!