Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006425.1 Corchorus capsularis cultivar CVL-1 contig06446, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22844

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2055--2090
16
2.2
16
90
9
56
44
5
19
30
1.73
8031--8060
15
1.9
16
93
6
53
6
16
16
60
1.56
8906--8968
24
2.5
24
85
10
74
49
7
14
28
1.71
9051--9124
27
2.7
27
93
2
121
39
28
13
18
1.89
9050--9144
27
3.5
27
85
4
93
42
26
14
16
1.87
14446--14487
16
2.7
16
85
3
59
40
30
11
16
1.85
18410--18438
13
2.1
14
93
6
51
6
17
0
75
1.01

Tables:   1

The End!