Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006426.1 Corchorus capsularis cultivar CVL-1 contig06447, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38782

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3495--3520
10
2.6
10
100
0
52
23
46
19
11
1.82
4569--4601
17
1.9
17
93
0
57
12
30
0
57
1.35
9989--10108
16
7.6
16
76
5
118
7
18
34
40
1.79
9989--10108
48
2.5
48
80
1
143
7
18
34
40
1.79
9990--10086
31
3.1
31
82
5
115
7
17
35
40
1.77
10976--11097
16
7.7
15
75
10
109
7
21
38
32
1.81
10980--11097
32
3.7
32
93
0
191
7
22
38
31
1.82
18913--18946
16
2.2
16
89
5
52
58
8
2
29
1.43
20229--20264
19
1.9
18
88
5
54
33
22
2
41
1.68
27962--27995
16
2.2
16
89
5
52
58
8
2
29
1.43
29278--29313
19
1.9
18
88
5
54
33
22
2
41
1.68
29477--29515
20
1.9
21
84
5
53
56
2
20
20
1.54
30176--30224
24
2.0
25
84
7
66
14
6
6
73
1.22
33563--33602
21
2.0
21
90
5
64
17
45
30
7
1.76

Tables:   1

The End!