Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006429.1 Corchorus capsularis cultivar CVL-1 contig06450, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24683

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18050--18103
19
2.6
21
77
19
60
38
20
3
37
1.70
23932--23968
19
1.9
19
100
0
74
35
21
16
27
1.94
24024--24070
22
2.1
22
84
7
60
29
12
4
53
1.58
24096--24160
23
2.9
22
79
4
67
40
15
12
32
1.84
24090--24159
22
3.1
22
77
4
68
38
18
11
31
1.86
24238--24319
38
2.4
31
71
24
74
58
10
15
14
1.63
24427--24494
31
2.2
32
81
10
86
48
5
13
32
1.66
24434--24500
31
2.2
31
86
5
91
49
5
16
28
1.69

Tables:   1

The End!