Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006443.1 Corchorus capsularis cultivar CVL-1 contig06464, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26324

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1643--1681
20
1.9
21
84
5
53
58
2
17
20
1.50
4613--4658
21
2.2
21
84
0
56
52
8
26
13
1.69
6601--6751
76
2.0
76
87
5
216
37
7
24
29
1.84
20323--20394
26
2.7
26
82
8
92
22
13
23
40
1.90
20790--20832
20
2.3
18
84
8
50
72
0
6
20
1.08
20820--20850
9
3.3
9
91
8
53
87
0
12
0
0.55
22273--22334
31
2.0
31
84
6
81
48
8
11
32
1.68
23405--23434
16
1.9
15
93
6
51
76
6
16
0
0.99
24829--24857
13
2.1
14
93
6
51
20
20
10
48
1.79

Tables:   1

The End!