Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006451.1 Corchorus capsularis cultivar CVL-1 contig06472, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25662

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1207--1263
6
10.2
6
78
17
61
80
15
1
1
0.87
5059--5279
108
2.0
108
94
0
397
42
15
14
27
1.86
16301--16455
79
2.0
79
93
0
265
28
22
7
41
1.81
22242--22360
36
3.4
35
82
13
156
27
17
8
46
1.77
22263--22370
32
3.2
32
80
14
137
28
18
6
46
1.74
22374--22675
36
8.5
36
83
3
364
23
19
9
46
1.80
22706--22831
36
3.5
36
92
2
191
28
11
11
48
1.74
22759--22815
20
3.1
20
65
29
54
29
8
10
50
1.67
22829--22975
11
13.0
11
86
5
177
10
23
10
55
1.65
22867--22975
34
3.2
34
90
2
157
11
22
10
55
1.65
22829--22975
23
6.5
23
85
5
183
10
23
10
55
1.65
23058--23165
40
2.7
40
77
5
119
25
14
11
48
1.77
23141--23206
34
1.9
34
81
9
80
25
16
10
46
1.79

Tables:   1

The End!