Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006461.1 Corchorus capsularis cultivar CVL-1 contig06482, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12887

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
267--297
3
10.3
3
100
0
62
32
0
0
67
0.91
6335--6414
29
2.7
30
82
3
108
35
16
31
17
1.92
8363--8539
87
2.0
87
98
0
345
27
15
17
40
1.89
9357--9435
2
40.5
2
83
5
99
2
45
1
50
1.23
9837--9882
3
15.7
3
86
13
69
0
34
0
65
0.93
10832--10897
33
2.0
33
96
0
123
16
18
31
33
1.93
12008--12044
18
2.1
18
89
0
56
8
35
0
56
1.29
12150--12180
2
15.5
2
100
0
62
48
0
0
51
1.00

Tables:   1

The End!