Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006466.1 Corchorus capsularis cultivar CVL-1 contig06487, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22077

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2779--2833
15
3.8
15
80
7
69
50
3
1
43
1.30
5962--5991
3
10.0
3
92
0
51
33
0
3
63
1.11
6533--6567
2
18.0
2
94
5
63
51
0
0
48
1.00
10711--10757
25
1.9
24
86
4
67
44
17
6
31
1.73
11782--11872
30
3.0
30
75
12
114
34
9
20
35
1.86
11753--11872
60
2.0
60
95
3
217
35
9
20
34
1.85
12132--12167
11
3.2
11
88
4
54
0
2
16
80
0.83
12368--12420
12
4.8
12
71
23
53
20
15
16
47
1.83
12368--12433
31
2.1
32
94
2
116
24
13
18
43
1.86
13469--14394
441
2.1
438
81
5
1051
42
12
13
31
1.82
16144--16372
42
5.5
42
81
0
224
27
36
13
22
1.92
16144--16372
126
1.8
126
82
0
296
27
36
13
22
1.92
19430--19643
42
5.1
42
72
6
175
28
36
14
20
1.92
19430--19632
84
2.4
84
85
1
255
27
36
14
21
1.93
19502--19768
141
1.9
141
86
1
383
28
37
14
19
1.91
20495--20566
16
4.5
16
82
6
92
23
16
33
26
1.96
20556--20600
17
2.6
17
82
0
63
24
11
31
33
1.90
20495--20607
16
6.9
17
77
5
90
23
13
30
31
1.93
21632--21734
15
6.5
15
71
14
73
22
23
33
20
1.97
21630--21777
33
4.6
33
79
11
189
22
23
31
21
1.98
21589--21686
48
2.0
48
86
0
133
20
25
32
21
1.97
21647--21707
18
3.6
18
71
13
65
26
21
32
19
1.97

Tables:   1

The End!