Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006469.1 Corchorus capsularis cultivar CVL-1 contig06490, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23964

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2263--2292
2
15.0
2
100
0
60
50
0
0
50
1.00
2844--2889
23
2.1
22
84
8
58
50
4
0
45
1.21
3385--3552
84
2.0
84
92
0
282
30
13
17
38
1.88
17563--17646
28
2.9
30
77
11
104
35
9
13
41
1.76
18852--18877
7
3.7
7
100
0
52
73
0
11
15
1.11
20828--20881
6
9.0
6
97
0
90
62
3
0
33
1.12
22600--22656
27
2.1
27
100
0
114
38
22
7
31
1.81
23347--23383
5
7.2
5
93
6
65
62
0
0
37
0.96
23926--23964
2
19.5
2
100
0
78
51
0
0
48
1.00

Tables:   1

The End!