Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000647.1 Corchorus capsularis cultivar CVL-1 contig00647, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2413

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--558
199
2.8
198
86
2
748
35
18
13
33
1.89
2146--2178
2
17.0
2
90
6
50
45
0
3
51
1.16
2145--2177
17
1.9
17
100
0
66
42
0
3
54
1.15
2146--2184
19
2.1
19
95
0
69
43
0
5
51
1.24
2325--2413
2
44.5
2
95
4
162
50
0
48
1
1.08

Tables:   1

The End!