Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006472.1 Corchorus capsularis cultivar CVL-1 contig06493, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1115

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
115--458
22
15.5
22
68
18
135
40
9
14
34
1.79
267--481
44
4.9
43
74
10
150
44
9
12
34
1.74
317--477
88
1.8
87
85
4
225
44
9
12
33
1.75
566--632
19
3.5
19
87
2
98
41
11
22
23
1.87
623--765
22
6.5
22
72
6
110
41
9
13
34
1.78
623--1071
44
10.4
42
67
17
158
38
10
14
36
1.80
765--870
23
4.7
22
76
4
86
41
8
12
37
1.73
764--844
23
3.6
23
79
1
92
40
4
13
40
1.66
855--914
22
2.7
22
76
5
68
38
11
10
40
1.75

Tables:   1

The End!