Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006473.1 Corchorus capsularis cultivar CVL-1 contig06494, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27294

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1281--1325
20
2.3
19
77
11
54
2
46
2
48
1.26
7051--7145
40
2.3
40
85
5
129
43
27
6
23
1.78
7814--7851
20
1.9
19
94
5
67
0
39
18
42
1.50
16131--16182
27
1.9
27
100
0
104
36
21
0
42
1.53
16178--16255
40
2.0
40
82
10
97
33
20
5
41
1.74
16473--16526
7
8.1
7
81
8
60
48
3
0
48
1.19
16473--16524
13
4.0
13
74
18
54
48
3
0
48
1.20
16473--16531
20
3.0
20
88
9
79
50
3
0
45
1.18
16539--16597
26
2.3
26
88
5
95
44
5
0
50
1.24

Tables:   1

The End!