Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006476.1 Corchorus capsularis cultivar CVL-1 contig06497, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24206

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2331--2440
33
3.3
33
78
5
132
32
12
16
38
1.86
2330--2453
66
1.9
66
93
0
212
29
12
18
39
1.87
2329--2466
66
2.1
66
87
0
204
29
11
18
39
1.86
2464--2577
33
3.6
31
83
5
131
32
10
16
40
1.83
4368--4474
33
3.2
33
88
2
144
22
38
28
10
1.87
13680--13713
11
3.2
10
84
15
50
50
17
2
29
1.61

Tables:   1

The End!