Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006480.1 Corchorus capsularis cultivar CVL-1 contig06501, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18666

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17090--17139
22
2.4
21
83
9
66
48
4
0
48
1.20
17981--18037
22
2.6
22
85
0
78
36
15
14
33
1.88
18213--18289
36
2.1
36
100
0
154
27
14
18
40
1.89
18288--18343
21
2.6
22
82
5
69
33
12
19
33
1.89
18249--18361
43
2.6
44
71
9
106
30
13
19
36
1.90
18328--18378
22
2.3
22
80
9
59
35
11
21
31
1.90

Tables:   1

The End!