Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006493.1 Corchorus capsularis cultivar CVL-1 contig06514, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17441

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
77--185
40
2.7
40
94
2
184
50
4
25
19
1.66
272--339
26
2.6
27
81
6
68
48
4
20
26
1.68
446--485
21
1.9
21
89
0
62
45
7
27
20
1.78
548--605
17
3.4
17
75
15
57
55
0
18
25
1.43
8164--8197
10
3.4
10
100
0
68
8
11
20
58
1.59
16199--16272
34
2.2
34
100
0
148
10
40
36
12
1.78

Tables:   1

The End!