Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006494.1 Corchorus capsularis cultivar CVL-1 contig06515, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28216

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2783--2809
11
2.5
11
100
0
54
81
0
0
18
0.69
6495--6571
33
2.3
32
82
10
93
22
42
25
9
1.82
7997--8032
11
3.3
11
96
0
63
19
0
25
55
1.43
12984--13087
33
3.2
33
82
8
122
21
44
25
8
1.81
13037--13088
10
4.9
10
73
13
50
23
48
23
5
1.72
13000--13091
33
2.8
33
86
6
125
22
45
23
7
1.78
19399--19476
29
2.7
29
86
4
95
12
11
35
39
1.80
20002--20042
19
2.2
19
100
0
82
24
34
19
21
1.97
26911--26968
28
2.1
29
81
12
68
18
18
5
56
1.59
26992--27072
22
3.7
22
76
12
78
25
20
4
48
1.70
26992--27062
21
3.3
22
76
9
58
25
21
4
49
1.67
27079--27447
22
18.1
22
72
18
232
21
18
4
55
1.59
27209--27442
7
32.7
7
69
10
89
21
17
3
56
1.56
27115--27442
78
4.2
78
78
13
261
21
18
4
55
1.60
27030--27447
100
4.2
100
91
2
673
21
18
4
55
1.60

Tables:   1

The End!