Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006504.1 Corchorus capsularis cultivar CVL-1 contig06525, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30728

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2996--3032
19
2.0
18
89
5
56
32
21
5
40
1.76
17764--17798
18
1.9
18
94
0
61
37
5
2
54
1.39
17772--17853
41
2.1
39
83
4
101
57
6
9
26
1.54
19784--20218
217
2.0
217
100
0
870
31
16
20
31
1.95
26020--26061
16
2.6
16
100
0
84
42
19
26
11
1.85
26395--26419
12
2.1
12
100
0
50
68
24
8
0
1.16
28281--28340
20
3.0
20
100
0
120
35
10
25
30
1.88
28917--28962
23
2.0
23
91
8
76
21
36
13
28
1.91

Tables:   1

The End!