Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006506.1 Corchorus capsularis cultivar CVL-1 contig06527, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15543

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1297--1333
17
2.2
17
95
0
65
37
27
5
29
1.79
5907--5991
29
2.9
28
82
8
107
32
16
30
20
1.94
7260--7327
35
1.9
35
96
0
127
30
23
10
35
1.88
9013--9315
65
4.5
67
81
7
321
23
20
17
38
1.92
9869--9901
3
11.3
3
87
6
50
36
36
0
27
1.57
10441--10476
10
3.6
10
84
0
54
33
5
19
41
1.75
10442--10484
20
2.2
20
86
0
59
34
6
18
39
1.78
13572--13650
30
2.5
32
87
4
117
50
11
12
25
1.73
13572--13634
32
2.0
32
93
3
110
53
11
12
22
1.69
15077--15524
169
2.7
168
86
3
618
40
15
14
29
1.88

Tables:   1

The End!