Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006514.1 Corchorus capsularis cultivar CVL-1 contig06535, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26838

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
149--318
85
2.0
85
98
0
331
28
22
14
34
1.93
9892--9946
23
2.2
24
78
18
60
50
0
14
34
1.43
11154--11217
21
3.1
21
80
8
78
28
21
14
35
1.92
12207--12488
140
2.0
140
99
0
555
36
20
12
30
1.89
12906--12989
42
2.0
42
88
0
123
21
10
27
40
1.86
14684--14828
66
2.2
66
80
9
154
36
10
17
35
1.84
14723--14828
22
4.9
21
77
4
104
35
10
16
36
1.83
15409--15448
18
2.2
18
86
8
55
47
0
0
52
1.00
18557--18604
25
1.9
25
87
8
71
41
2
6
50
1.39
18557--18606
12
3.7
14
82
15
52
40
2
8
50
1.43
19944--20146
63
3.0
69
87
8
319
27
14
21
36
1.93
21185--21222
3
12.3
3
88
5
58
0
31
0
68
0.90
22576--22606
2
15.5
2
100
0
62
48
0
0
51
1.00

Tables:   1

The End!