Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006520.1 Corchorus capsularis cultivar CVL-1 contig06541, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23987

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3016--3081
32
2.0
33
88
2
98
50
4
25
19
1.67
3767--3791
2
12.5
2
100
0
50
52
0
0
48
1.00
6082--6126
20
2.2
20
88
0
63
22
4
22
51
1.66
10601--10648
18
2.5
20
80
16
64
45
0
4
50
1.21
10764--10802
2
20.5
2
84
10
55
46
2
0
51
1.14
11376--11417
3
14.0
3
100
0
84
66
0
0
33
0.92
19259--19294
18
2.0
18
100
0
72
44
11
33
11
1.75
21677--21900
111
2.0
111
93
0
385
26
21
23
27
1.99

Tables:   1

The End!