Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006529.1 Corchorus capsularis cultivar CVL-1 contig06550, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14981

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1387--2142
388
1.9
388
94
0
1316
31
16
17
34
1.93
9574--9643
2
36.5
2
75
13
58
48
1
4
45
1.30
12604--12647
22
2.0
21
86
4
61
47
4
2
45
1.35
13731--13764
17
2.0
17
100
0
68
52
11
5
29
1.61
13701--13740
2
19.5
2
94
5
71
50
2
0
47
1.14
13792--13851
31
2.0
30
87
9
86
28
16
3
51
1.60
14159--14196
19
2.0
20
85
15
53
28
5
2
63
1.30
14299--14375
22
3.4
22
75
10
66
33
11
16
37
1.85
14418--14557
22
6.4
20
73
11
82
36
9
18
35
1.83
14422--14517
44
2.2
44
81
7
106
35
9
20
34
1.85
14563--14726
22
7.3
22
71
13
102
41
10
15
32
1.81
14850--14974
22
5.7
22
74
7
101
40
10
12
36
1.78
14850--14974
44
2.9
43
81
4
135
40
10
12
36
1.78

Tables:   1

The End!