Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006531.1 Corchorus capsularis cultivar CVL-1 contig06552, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11210

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
200--226
6
4.5
6
100
0
54
55
14
0
29
1.40
223--282
13
4.7
13
91
2
95
58
8
11
21
1.59
3796--3827
12
2.7
12
95
0
55
21
43
25
9
1.82
3820--3887
30
2.3
29
80
12
75
23
38
29
8
1.85
6628--6728
41
2.6
39
83
7
127
30
13
8
46
1.74
8926--9022
27
3.7
26
83
5
124
14
12
23
49
1.77
8925--9042
27
4.4
26
79
10
105
16
13
22
46
1.83
9766--9883
25
4.5
26
76
7
105
16
14
23
44
1.85

Tables:   1

The End!