Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006541.1 Corchorus capsularis cultivar CVL-1 contig06562, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34071

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2830--2860
6
5.3
6
96
3
55
51
12
0
35
1.40
5637--5675
21
1.9
19
85
10
51
43
20
10
25
1.83
8749--8796
21
2.4
19
86
6
69
20
8
6
64
1.43
9089--9119
6
5.3
6
96
3
55
51
12
0
35
1.40
13882--13977
31
3.1
31
95
0
174
21
15
20
41
1.90
14838--14867
3
10.3
3
92
7
53
66
0
0
33
0.92
17739--17772
7
5.1
7
89
10
54
14
0
44
41
1.45
19681--19713
17
1.9
17
88
11
50
39
0
0
60
0.97
22921--23088
78
2.2
78
92
1
275
50
1
12
35
1.51
31208--31494
132
2.2
132
90
0
448
23
34
12
28
1.92
31610--31672
27
2.3
27
91
0
99
31
30
19
19
1.96

Tables:   1

The End!