Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006542.1 Corchorus capsularis cultivar CVL-1 contig06563, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24728

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
896--928
5
6.8
5
89
6
50
87
12
0
0
0.53
897--929
9
3.6
9
92
8
57
87
12
0
0
0.53
8923--8957
7
5.0
7
92
0
61
88
11
0
0
0.51
20667--20949
139
2.0
139
97
0
539
29
21
14
33
1.94
22578--22648
37
1.9
37
91
5
117
38
8
15
38
1.78

Tables:   1

The End!