Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006548.1 Corchorus capsularis cultivar CVL-1 contig06569, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12972

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4836--4871
19
1.9
18
88
5
54
41
8
22
27
1.82
5465--5507
10
4.4
9
80
13
50
11
23
2
62
1.40
5544--5641
21
4.7
20
77
8
106
22
21
5
51
1.67
5554--5642
42
2.1
43
89
2
135
21
19
4
55
1.61
5655--5862
35
5.9
35
82
7
224
42
8
22
26
1.81
5864--5935
32
2.2
32
87
0
108
52
5
16
25
1.65

Tables:   1

The End!