Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006555.1 Corchorus capsularis cultivar CVL-1 contig06576, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6309

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21--100
40
2.0
40
87
0
115
37
20
30
12
1.89
310--339
6
5.0
6
91
0
51
50
13
0
36
1.42
336--376
13
3.2
13
93
3
66
60
7
9
21
1.52
1975--2154
47
3.9
46
84
6
229
34
21
28
15
1.94
1975--2154
93
1.9
93
85
2
245
34
21
28
15
1.94
2647--2827
49
3.7
48
81
10
188
37
12
6
44
1.66

Tables:   1

The End!