Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000656.1 Corchorus capsularis cultivar CVL-1 contig00656, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8059

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2034--2105
29
2.4
31
88
6
105
50
9
12
27
1.72
2038--2105
31
2.3
29
87
7
93
50
10
11
27
1.71
2389--2537
45
3.5
45
74
20
176
40
20
4
33
1.73
2365--2528
80
2.0
80
97
0
310
39
21
5
34
1.76
2365--2480
35
3.0
36
72
21
101
37
21
6
35
1.78
3421--3502
38
2.2
38
82
4
94
46
12
1
40
1.49
3498--3544
3
15.7
3
95
0
85
65
2
0
31
1.04
3539--3565
14
1.9
14
100
0
54
55
7
0
37
1.28
5119--5216
51
1.9
51
89
8
155
57
3
31
8
1.44
6449--6493
17
2.6
17
85
0
63
40
17
6
35
1.76
7203--7245
21
2.0
21
100
0
86
41
13
20
23
1.88

Tables:   1

The End!