Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006571.1 Corchorus capsularis cultivar CVL-1 contig06592, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8564

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
815--844
11
2.7
11
94
0
51
40
0
20
40
1.52
2173--2209
6
6.3
6
96
3
67
35
0
13
51
1.41
2774--2808
15
2.3
15
90
0
52
17
11
14
57
1.66
5228--5272
4
11.2
4
88
9
65
46
0
0
53
1.00
6812--6859
24
2.0
24
95
0
87
14
29
27
29
1.95
7136--7384
122
2.0
126
90
4
400
38
10
6
44
1.64
8048--8309
107
2.5
105
92
2
420
40
8
9
41
1.68

Tables:   1

The End!