Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006582.1 Corchorus capsularis cultivar CVL-1 contig06603, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23988

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1118--1147
13
2.3
13
100
0
60
56
6
13
23
1.60
4117--4164
22
2.3
20
86
10
62
39
25
16
18
1.91
4084--4186
53
1.9
53
88
0
152
35
26
20
17
1.94
4136--4234
31
3.2
31
83
0
117
33
28
21
17
1.95
5253--5279
2
13.5
2
100
0
54
48
0
0
51
1.00
5958--6032
30
2.5
30
84
0
96
18
6
45
29
1.75
18203--18228
3
8.7
3
100
0
52
30
0
34
34
1.58
19296--19351
12
4.6
12
95
4
103
25
23
16
35
1.94
19296--19351
25
2.3
24
96
3
103
25
23
16
35
1.94

Tables:   1

The End!