Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006596.1 Corchorus capsularis cultivar CVL-1 contig06617, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3232

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1333--1443
57
1.9
57
94
3
197
30
24
9
36
1.86
1802--1836
18
1.9
18
100
0
70
11
8
11
68
1.39
2096--2134
18
2.2
18
100
0
78
30
5
10
53
1.56
2451--2486
18
2.0
18
100
0
72
22
11
22
44
1.84
2452--2492
18
2.3
18
91
0
64
24
9
21
43
1.83
3157--3200
9
4.9
9
91
0
70
18
22
22
36
1.95

Tables:   1

The End!