Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006597.1 Corchorus capsularis cultivar CVL-1 contig06618, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2847

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--827
154
5.4
154
89
1
1221
22
18
19
39
1.93
3--827
306
2.7
307
88
1
1208
22
18
19
39
1.93
737--914
90
2.0
90
94
0
311
17
20
20
41
1.90
583--1068
244
2.0
244
92
0
812
22
19
18
39
1.92
827--2846
154
13.2
154
89
2
2868
24
17
17
39
1.91
431--1222
398
2.0
396
89
1
1210
23
18
18
39
1.92

Tables:   1

The End!