Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006599.1 Corchorus capsularis cultivar CVL-1 contig06620, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1998

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12--78
26
2.6
26
97
0
125
26
1
8
62
1.33
151--208
27
2.0
30
87
9
86
36
3
1
58
1.25
188--221
15
2.3
15
94
0
59
44
0
5
50
1.26
249--357
25
4.6
25
77
17
115
50
2
1
44
1.26
259--354
14
6.9
13
76
16
70
48
3
2
45
1.29
256--354
8
12.9
8
70
12
73
49
3
2
45
1.29
371--445
15
4.7
16
85
9
91
54
1
5
38
1.31
353--449
32
3.2
32
77
10
87
53
1
5
40
1.30
1518--1544
13
2.1
13
100
0
54
29
29
0
40
1.57

Tables:   1

The End!