Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000665.1 Corchorus capsularis cultivar CVL-1 contig00665, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1207

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
228--287
24
2.5
24
88
2
84
35
45
6
13
1.70
803--861
27
2.1
28
90
3
93
18
20
0
61
1.35
809--880
28
2.6
28
85
10
87
16
22
0
61
1.35
925--1205
22
13.7
21
75
16
270
22
20
4
52
1.66
913--1205
122
2.4
122
95
1
527
22
21
5
51
1.67
1095--1174
35
2.2
36
93
4
135
22
23
3
50
1.65
913--1205
21
14.4
20
72
19
214
22
21
5
51
1.67

Tables:   1

The End!