Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006665.1 Corchorus capsularis cultivar CVL-1 contig06686, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32746

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3980--4042
24
2.6
24
89
0
99
36
22
23
17
1.95
4562--4777
109
1.9
111
84
7
287
44
19
9
26
1.81
5089--5137
23
2.1
23
85
11
64
30
4
8
57
1.47
19187--19213
14
1.9
14
100
0
54
0
70
0
29
0.88
21007--21031
12
2.1
12
100
0
50
56
0
8
36
1.29
23472--23742
137
2.0
135
92
2
447
36
12
15
36
1.84
26096--26133
2
19.0
2
88
0
58
47
2
2
47
1.30
26090--26131
20
2.1
20
100
0
84
45
4
4
45
1.45

Tables:   1

The End!