Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006666.1 Corchorus capsularis cultivar CVL-1 contig06687, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35297

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1213--1243
3
10.3
3
100
0
62
67
0
0
32
0.91
3094--3137
21
2.2
20
83
4
52
31
6
4
56
1.46
3395--3436
21
2.0
21
90
9
68
30
14
2
52
1.54
15173--15206
11
3.2
10
84
15
50
50
17
2
29
1.61
15928--15959
11
2.9
11
100
0
64
37
18
34
9
1.83
24854--24933
41
1.9
42
84
2
108
48
3
8
38
1.52
26721--26754
11
3.2
10
84
15
50
50
17
2
29
1.61
30010--30043
11
3.2
10
84
15
50
50
17
2
29
1.61
32008--32098
30
3.0
30
88
3
130
18
31
18
30
1.95

Tables:   1

The End!