Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006675.1 Corchorus capsularis cultivar CVL-1 contig06696, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27344

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
292--317
2
13.0
2
100
0
52
50
0
0
50
1.00
1987--2021
15
2.3
15
100
0
70
11
25
14
48
1.77
6297--6329
16
2.1
16
100
0
66
33
18
18
30
1.94
9282--9314
17
1.9
17
88
11
50
72
6
3
18
1.18
15257--15358
31
3.4
30
86
2
134
42
16
24
16
1.88
15448--15511
29
2.2
30
88
2
94
45
7
21
25
1.78
19008--19042
8
4.4
8
85
0
52
51
20
2
25
1.61
19166--19358
34
5.7
34
93
3
311
24
28
21
25
1.99
19166--19358
69
2.9
68
90
4
311
24
28
21
25
1.99
23354--23417
31
2.0
32
85
8
87
39
23
1
35
1.64

Tables:   1

The End!