Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006676.1 Corchorus capsularis cultivar CVL-1 contig06697, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13400

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
468--513
24
1.9
24
95
0
83
6
28
23
41
1.79
658--916
106
2.5
106
93
0
430
24
20
20
33
1.97
906--970
24
2.7
24
100
0
130
7
24
21
46
1.77
3570--3812
32
7.9
31
71
10
151
24
29
12
33
1.92
3612--3813
29
6.7
29
74
8
145
23
29
12
34
1.92
7372--7409
19
2.0
19
94
0
67
21
28
5
44
1.73
7600--7723
66
1.9
66
86
0
176
21
29
16
31
1.96

Tables:   1

The End!