Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006689.1 Corchorus capsularis cultivar CVL-1 contig06710, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27422

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1647--1675
14
2.1
14
100
0
58
58
6
13
20
1.58
3261--3298
16
2.3
17
90
4
60
31
52
15
0
1.43
13795--14078
143
2.0
143
97
0
541
23
17
22
36
1.95
19638--19673
18
2.1
17
94
5
63
63
8
16
11
1.49
20265--20322
18
3.2
19
90
4
84
31
20
3
44
1.68
20734--20819
31
2.8
31
87
0
118
16
20
27
34
1.94
22817--22852
18
2.1
17
94
5
63
63
8
16
11
1.49
23444--23501
18
3.2
19
90
4
84
31
20
3
44
1.68
23873--23973
31
3.3
31
81
2
96
21
24
22
30
1.99
26071--26173
31
3.3
31
97
0
188
26
18
24
31
1.98
26678--26721
21
2.0
22
87
12
65
45
4
9
40
1.56

Tables:   1

The End!