Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006691.1 Corchorus capsularis cultivar CVL-1 contig06712, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32480

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
336--389
27
2.0
27
100
0
108
11
25
14
48
1.77
1768--1797
2
15.0
2
100
0
60
50
0
0
50
1.00
2557--2646
44
2.0
44
85
4
119
32
11
21
35
1.88
5869--5956
45
2.0
45
84
4
115
31
19
20
28
1.97
6068--6165
50
2.0
50
87
0
142
33
14
21
30
1.93
5707--6317
211
2.9
209
79
7
588
30
15
17
37
1.91
6483--6897
210
2.0
210
95
0
740
28
21
10
39
1.87
8088--8146
29
2.0
29
93
0
100
13
35
10
40
1.78
8243--8319
40
1.9
40
89
5
120
28
15
15
40
1.88
9662--9718
25
2.2
26
81
6
71
43
19
14
22
1.86
12859--12941
30
2.7
30
83
5
96
34
19
24
21
1.96
18633--18669
19
2.0
18
89
5
56
29
21
8
40
1.82
31693--31760
29
2.3
29
82
5
82
35
14
14
35
1.87
32452--32476
2
12.5
2
100
0
50
52
0
0
48
1.00

Tables:   1

The End!